Instructional Videos

Note

These videos were originally created for the BV-BRC project. While they cover the same core concepts as the MAAGE website. Stay tuned: A MAAGE-specific video series is currently being produced and will replace or supplement these videos as it becomes available.

Quick Start

In addtion to Quick Reference Guides and Tutorial documentation, the YouTube Channel https://www.youtube.com/channel/UCDkT2ZCWhK3GBtm5R-o1J4A provides recorded videos demonstrating use of most of the major tools, services, and other features of the platform.

This playlist provides brief demonstrations of key features of the platform.

• Introduction

• Searching for data

• Filtering search results

• Annotating a genome

• Viewing a completed annotion job

• Workspace guide

Analysis Services

These videos provide step-by-step demonstrations of Analysis Services.

• Comparative Systems

• Comprehensive Genome Analysis

• BLAST

• Similar Genome Finder

• Phylogenetic Tree

• Genome Alignment

• Primer Design

• MSA and SNP Analysis

• Gene Tree

• Proteome Comparison

• Taxonomic Classification

• Metagenomic Binning

• Expression Import

• RNA-Seq Analysis

• Fastq Utilities (Video Playlist)

Visualizations and Other Tools

These videos provide demonstrations of interactive visualizations and other tools and features in the resource.

• Compare Region Viewer

Command Line Interface

These videos provide instructions for installation and use of the Command Line Interface (CLI).

• CLI Installation

• CLI Overview

• CLI Job Submission