MAAGE Documentation

Updates

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  • 2025
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  • Upcoming Events

Help Resources:

• Overview
  • About MAAGE
  • Help Documentation Organization
• Quick Start
  • Quick Start Videos
  • Data and Functionality Overview (for PATRIC Users)
• Data Sources and Protocols
  • Genome Annotation Protocol
  • Antimicrobial Resistance (AMR)
• Quick Reference Guides
  • Organisms and Data Types
  • Advanced Searches
  • Tools & Services
  • Workspaces and Groups
  • Global Search
  • Registration and Sign In
  • Website Views, Tables, Filters, Action Bar
  • System Requirements
  • FTP Site
• Tutorials
  • Genomics
  • Phylogenomics Services
  • Protein Tools
  • Metagenomics
  • Transcriptomics
  • Utilities
  • Viral Services
  • Data Visualizations
• Command Line Interface
  • Installing the CLI Release
  • Tutorials and Reference Documentation
  • RAST Tutorials
• Instructional Videos
  • Quick Start
  • Analysis Services
  • Visualizations and Other Tools
  • Command Line Interface
• Webinars
  • Back to Basics Virus Series
  • Finding and Analyzing RSV and Influenza Data in the MAAGE
  • Monkeypox and Orthopoxvirus Mini Symposium
  • Ticks and Tick-Borne Pathogens
  • Introduction to MAAGE
• Workshops
  • Workshop Schedule